Falmouth 2015 - Group 2
A Study on the Fal Estuary

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Offshore



Contents


Information


Date: 27/06/15

Vessel: R.V. Callista

Weather: Fair. No measurable precipitation

Sea State: Small waves, frequent white horses.

Cloud Cover: 3/8

Tide: Low tide (1.70m): 8:18 UTC

High tide (4.20m) 14.17 UTC

Location: 50°05.67’N, 4°52.02’W

8:36 UTC – beginning of ebb tide going out. Weak tidal flow at this time, westerly flow out to the channel.


Profile 1

Lat: 50˚05.543N

Long: 004˚52.011W

Time UTC: 8:05:29


Profile 2

Lat: 50˚05.529N

Long: 004˚51.330W

Time UTC: 8:48:15


Profile 3

Lat: 50˚05.708N

Long: 004°52.115W

Time UTC: 9:24:00


Zooplankton net samples:

1st net depth: 45m-35m

Time UTC: 9:57:25 – 9:58:04

2nd net depth: 35m-25m

Time UTC: 10:13:03 – 10:13:15

3rd net depth: 25m-surface

Time UTC: 10:24:32 – 10:26:10


Profile 4

Lat: 50°05.660N

Long: 004°52.014W

Time UTC: 10:33:30


Profile 5

Lat: 50°05.616N

Long: 004°52.115W

Time UTC: 11:00:00

Introduction


In the first week of Falmouth, all the offshore sampling expeditions had collected samples from a widespread group of stations, with all groups collecting samples from ‘the standard station’ also known as station B. For this trip offshore, the decision was made to compile a time series data set of station B, in order to look at how the physical factors at this station changed during the day, giving the other stations a set of data to compare to. Also, the time series would demonstrate how factors like plankton abundance, temperature, fluorescence and irradiance change throughout the day, possibly due to the altering wave action, tides and weather.


Conditions

South westerly prevailing winds with a large fetch blowing across the Atlantic make offshore at Falmouth an exposed area.

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Methods


5 profiles were made at Station B using the CTD rosette (figure 1):


The rosette contained a number of devices of which only 6 Niskin bottles and the CTD itself were used.


At each station the rosette was sent down to c.60m and returned to the surface, measuring a number of parameters, mainly noting temperature, fluorescence and irradiance.


At profiles 1, 3 and 5 Niskin bottles were fired at different depths. Once the CTD reached the bottom of the profile, the dry lab team decided the most effective depth to sample and on the return to the surface fired the Niskin bottles at these chosen depths.


From the Niskin bottles, water samples were taken:


Figure 1 - CTD rosette

Figure 2 - learning how to deploy a messenger to close the net at depth.

Results and Discussion


Figure 3 - Depth profiles for profile 1, UTC 8:05:29, for irradiance, temperature and fluorescence with dashed lines demonstrating the depths where each Niskin bottle was fired.

Figure 4 - Depth profile for profile 3, UTC 9:24:00, for irradiance, temperature and fluorescence with dashed lines demonstrating the depths where each Niskin bottle was fired.

The graphs clearly show the thermocline and how it alters throughout the day. The thermocline is where the highest abundances of plankton are seen, due to the action of mixing both above and below it. The fluorescence peak indicates the highest peak of plankton and therefore reveals the position of the thermocline. The profiles demonstrate that levels stay relatively constant throughout the day, except for some minor temperature changes. The only significant change is that in the last profile, the irradiance level begins at 4000, when the other stations show numbers closer to 2000, or below. This is likely due to a few contributing factors, for example that profile 5 was taken later in the morning when the sun was higher in the sky and also as the morning carried on, cloud cover decreased, which would increase irradiance. In general, however, these profiles are very similar, demonstrating that station B, as the standard station didn’t alter much throughout the day and any changes would most likely be long term. This makes station B a good standard to compare the other stations.


Thermoclines are areas of rapid change in temperature. They are formed when the surface layer of a body of water is heated up, making it less dense, whilst the water below remains cool. The thermocline at station B is broken up into two parts (figure 6). The double thermocline may be due to a small amount of mixing within the surface layer. At 8-10 m depth, there is a rapid change in temperature of about 1°C. A greater temperature difference of about 2.4°C occurs between 19-30m. The depth of the thermocline generally increased as time progressed.

Figure 5 - Depth profile for profile 5, UTC 11:00:00, for irradiance, temperature and fluorescence with dashed lines demonstrating the depths where each Niskin bottle was fired.

Figure 6 - Time-series graph of temperature change from profiles 1-3 and 5. Profile 4 was not used due to discrepancies between the up profile and down profile.

Irradiance decreased exponentially with depth in water due to light being scattered and reflected by particles and water molecules (1). Light penetrated to a greater depth as time progressed in the day due to an increase in solar radiation (figure 7). Photosynthesis can occur at 1% of the surface light. Surface irradiance values for most of the time points were between 1500-2000 (Watts m-2); 1% of this value lies at about 29-30 m depth. This depth corresponds to where the chlorophyll maxima and thermocline were found.

Left: Figure 7 - Time-series graph of irradiance change from profiles 1-3 and 5. Profile 4 was not used due to discrepancies between the up profile and down profile.

Below: Figure 8 - Time-series graph of fluorescence change from profiles 1-3 and 5. Profile 4 was not used due to discrepancies between the up profile and down profile.

The depth of the chlorophyll maxima in the water column is indicated by the large peaks seen in the fluorometry-depth profile seen in figure 6. This figure shows a time series of fluorescence against depth at station B offshore (50° 05.5’N, 4° 52.0’W) over a 3 hour period.


Fluorescence slowly increased from 0.04 v at the surface, to 0.09 v at around 20 m during the three hours of sampling at station B (50°05.5'N, 4°52.0'W). Fluorescence peaked between 25 m and 33 m at each time the water column was sampled. At 08:05 UTC there was a double peak of fluorescence, with the first peak being at a similar depth to the other time profiles (~28 m) and the second peak being at around 32-33 m. Maximum fluorescence was recorded at 11:00UTC with a value of 0.46 v at a depth of 28 m. Following the peaks, fluorescence decreased and stabilised at ~0.04-0.05 v from about 29-34 m. The thermocline occurred between 19m and 30 m. The chlorophyll peaks were seen either at the greater depth of the thermocline or just below it (see figure 6). At this depth, phytoplankton can utilise the cold, nutrient-rich water found below the thermocline and still receive enough light to photosynthesise.


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Chemistry

Samples were chemically analysed via the same methods used for processing estuarine samples.

Nitrate concentration is clearly depleted, beginning at around 10m and stays at a low level until it approaches 30m where it begins to increase in concentration until c.60m where it is again reduced. This depletion below the surface waters is result of the thermocline, where the highest abundance of plankton is found, and therefore almost all available nitrate is used up for growth. Below the thermocline, c. late 20s/low 30metres, the mixing in the water column nutrients from depth, causing an increase in nitrate concentration. The depletion at the seafloor (c.60m) is likely due to benthic organisms’ nutrient intake.

Figure 10 - Depth profile of Nitrate concentration at standard station B.

Figure 11 - Depth profile of Silicon concentration at standard station B.

Silicon concentration is increased quickly just below the surface due to mixing until it reaches around 10m. From then on a severe trough is seen, demonstrating depletion by organisms, predominantly diatoms above and in the thermocline, where they are most abundant. Below the thermocline, the concentration slowly increases, but not to the same concentration seen before the thermocline. The heightened increase at the seabed is due to dead diatom bodies reaching the seabed and dissolving to release silicon again into the water column.

Figure 12 - Depth profile of Phosphate concentration at standard station B.

Phosphate shows a small depletion at c.28m, in the centre of the thermocline; however on the whole it slowly increases in concentration down the water column. This is most likely due to the fact that phosphate is present in such low concentrations that after being depleted at the thermocline, it takes little time for the concentration to be replenished by mixing.

Figure 13 - Depth profile of O2 saturation at standard station B.

The distribution is similar to the distribution of nitrate, with saturation through the water column is relatively constant apart from the depletion shown from 10 to 30metres and depletion at the seabed, c. 65m. The trough is due to the highest abundance of plankton (and therefore bigger animals) in and above the thermocline, causing an increase in O2 demand and hence a depletion in O2 saturation. The decrease in saturation at the sea bed is (again similar to nitrate) due to benthic organisms.

Chlorophyll follows a similar distribution to silicon, although the main part of the peak is a little lower, at c.30m, almost the centre of the thermocline. After the thermocline, the chlorophyll, expectedly, decreases until the bottom of the sea bed as less light is available and photosynthesis becomes impossible.

ADCP Offshore data

ADCP data was taken for the entire time series at station B from 0801-1111 UTC. The primary aim was to identify internal waves by measuring the backscatter along the thermocline. The internal wave could be tracked by the zooplankton, which increase the backscatter. The zooplankton will change depth according to the change in the thermocline depth. Unfortunately the desired results were not identified by the overall data collected. Within the dataset there was significant backscatter noticed at certain points, which is caused by the increased concentration in zooplankton, thus reflecting the positioning of the thermocline. This significant backscatter can be identified in figure 9, and a change in depth of the maximum backscatter can also be noticed, thus showing that the thermocline does change depth, showing internal waves.

Figure 9 - Two examples of backscatter peaks from the ADCP data.

Figure 14 - Depth profile of Chlorophyll concentration at standard station B.

References


  1. Lorenzen, C. (1972) Extinction of Light in the Ocean by Phytoplankton. ICES Journal of Marine Science, Volume 34, Issue 2, pp. 262-267
  2. Spector, D. (1984). Dinoflagellates. Orlando: Academic Press.
  3. Ichimi, K., Kawamura, T., Yamamoto, A., Tada, K. and Harrison, P. (2012). Extremely High Growth Rate of the Small Diatom Chaetoceros salsugineum Isolated from an Estuary in the Eastern Seto Inland Sea, Japan 1. Journal of Phycology, 48(5), pp.1284-1288.
  4. Steele, J. (1978). Spatial pattern in plankton communities. New York: Plenum Press.
  5. Ianora, Adrianna, Serge A. Poulet, and Antonio Miralto. 'The Effects Of Diatoms On Copepod Reproduction: A Review'. Phycologia 42.4 (2003): 351-363.
  6. De Bernardi, R et al. (1978). Cladocera; Predators and Prey. Developments in Hydrobiology 35 225-243
  7. Vergara-Soto, Odette et al. 'Functional Response Of Sagitta Setosa (Chaetognatha) And Mnemiopsis Leidyi (Ctenophora) Under Variable Food Concentration In The Gullmar Fjord, Sweden'. Revista de biología marina y oceanografía 45.1 (2010)

Biology


Phytoplankton

Dinoflagellates were the most abundant phytoplankton throughout the time series taken at this station. This is to be expected, as dinoflagellates bloom after the diatom spring bloom when nutrient levels are lower and there is less competition with the larger diatoms (2). Throughout the entire time series dinoflagellates greatly exceeded any other phytoplankton group, with the total number being 209 cells/ml whilst diatoms were only found at 92 cells/ml.


Interestingly, it can be seen that the majority of the dinoflagellate population maintains a fairly stable position in the water column, around 30-35m depth, in other words around the thermocline, seen in all the figures. In contrast, the diatoms and ciliates seem to follow a diurnal migration pattern, moving from the nutrient rich thermocline to the well-lit surface waters, as they are not tolerant of low light levels (3).There is a significant increase in total diatoms and ciliates in the surface reading between 8:05 UTC and 11:04 UTC, increasing from 1 cell/ml to 37 cell/ml in Figures 1 and 3. The dinoflagellates may be choosing to stay near the thermocline to exploit the nutrient rich waters. Their ability to do so may be due to light shade adaptation seen in some species such as those from the Ceratium  genus (4). In fact, Ceratium fusus was the most abundant dinoflagellate throughout this time series which would explain the large peak in dinoflagellates at 35m throughout the time series.

Zooplankton

Throughout the time series experiment on Callista three Zooplankton closing net transects were taken consecutively, between 0-45m.

Figure 18 - Sampled at station 37 at depths of 45-35 (ZA) at 09:57 UTC. The significant groups of zooplankton are marked on the graphs.

Figure 19 - Sampled at station 37 at depths of 25-35 (ZB) at 10:13 UTC. The significant groups of zooplankton are marked on the graphs.

Copepoda, Cladocera, Hydromedusae and Echinoderm larvae are the most prolific, whilst other species were recorded in much smaller concentrations.  There is a thermocline at 10m and 35m. The Dinoflagellates are the most abundant around the thermocline with other phytoplankton migrating into greater light intensities diurnally. A diverse phytoplankton community will support a healthier zooplankton community. Copepoda increase in abundance with depth, and they are at there greatest concentration around the thermocline.


Both Copepoda and Echinoderm larvae are most prolific at this depth (between 35-45m), occurring at 217m3 and 102m3 as seen in Figure 18. There are a few other species of zooplankton present but all occur at much lower levels of 12.75m3. This may be due to the lower levels of phytoplankton-excepting Dinoflagellates- due to a reduction in Photosynthetically active radiation (PAR) reaching these depths. Dinoflagellates are consumed most by Copepoda than any other organism explaining their abundance (6)


In the middle of the water column between 25m-35m the zooplankton had the greatest diversity and abundance, this can be seen in Figure 19. The total number of organisms present was 547.77m3 and there were a total of 8 species identified, opposing to only 7 species present at the other depths. The peak in zooplankton above the thermocline may correlate with the diurnal migration of phytoplankton, since this transect was taken at 10:13 UTC and the migration has already begun. Hydromedusae was significantly more abundant in the mid water column, this may be due to the increase in the food source since they consume other zooplankton.


At the surface between 0-25m the Cladocera dominate making up more than 50% of the zooplankton recorded, see Figure 20. This is unsurprising since it is commonly one of the most dominant pelagic populations, especially in freshwater or eutrophic systems (6) Copepoda and chaetognaths make up similar amounts of the zooplankton at this depth, chaetognaths have mechanoreceptors and it is believed that they use this to follow the vertical migration of there prey diurnally (7).

Figure 20 - Sampled at station 37 at depths of 25-surface (ZC) at 10:24 UTC. The significant groups of zooplankton are marked on the graphs.

Start time - 8:05 UTC

Start time - 9:24 UTC

Start time - 11:04 UTC

Figure 15 - Shows all phytoplankton groups to be around the thermocline at around 35m depth. Dinoflagellates are the most abundant.

Figure 16 - Shows the migration of diatoms and ciliates to shallower depth, with increased abundance in surface waters. Dinoflagellates maintain position at thermocline.

Figure 17 - The continued migration of diatoms and ciliates is shown with the increase in abundance in the surface reading. Again, dinoflagellates are found on the thermocline.

Between profiles 3 and 4, three closing nets were used to collect samples of the zooplankton present in the water column. A weighted closing net was used, which was deployed to a decided depth eg. 45m and then pulled up to a shallower depth, eg. 35m. A messenger was then deployed to close the net, creating a sample of a section of the water column. The 3 trawls carried out were from 45-35m, 35-25m and 25m to surface to obtain a sample that would be representative of the entire water column.


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